TY - JOUR
T1 - Edaphocola aurantiacus gen. nov., sp. nov., a new member of the family Chitinophagaceae isolated from wetland soil in South Korea
AU - Choi, Jiwon
AU - Cha, Seho
AU - Chhetri, Geeta
AU - Yang, Dahye
AU - Seo, Taegun
N1 - Publisher Copyright:
© 2018, Springer Nature Switzerland AG.
PY - 2019/5/15
Y1 - 2019/5/15
N2 - A short rod-shaped, yellow–orange pigmented, strictly aerobic bacterium, designated as strain H2 T , was isolated from the wetland soil of Halla Mountain, Jeju-island, South Korea. Growth was observed at temperatures of 10–30 °C (optimum at 25–30 °C), pH of 6–8 (optimum at pH 7), and salt concentrations of 0–1% (w/v) NaCl (optimum at 0%). The strain H2 T was found to be a catalase and oxidase-positive, non-motile, Gram-negative bacterium. On the basis of 16S rRNA gene sequence similarity and phylogenetic analysis, strain H2 T was found to be related to the members of the Chitinophagaceae family, being closely related to Taibaiella chishuiensis AY17 T (94.3% sequence similarity). The major polar lipids are phosphatidylethanolamine and glycolipid. Strain H2 T contained MK-7 as the only menaquinone as well as iso-C 15:0 , iso-C 15:1 G and iso-C 17:0 3-OH as the major fatty acids (> 15%). The DNA G+C content of strain H2 T was determined to be 48.3 mol%. Based on the phylogenetic, phenotypic characteristics and chemotaxonomic analysis data, strain H2 T (= KCTC 62115 T = JCM 32353 T ) should be classified as representative of a novel species of a novel genus within the family Chitinophagaceae, for which the name Edaphocola aurantiacus gen. nov., sp. nov., is proposed.
AB - A short rod-shaped, yellow–orange pigmented, strictly aerobic bacterium, designated as strain H2 T , was isolated from the wetland soil of Halla Mountain, Jeju-island, South Korea. Growth was observed at temperatures of 10–30 °C (optimum at 25–30 °C), pH of 6–8 (optimum at pH 7), and salt concentrations of 0–1% (w/v) NaCl (optimum at 0%). The strain H2 T was found to be a catalase and oxidase-positive, non-motile, Gram-negative bacterium. On the basis of 16S rRNA gene sequence similarity and phylogenetic analysis, strain H2 T was found to be related to the members of the Chitinophagaceae family, being closely related to Taibaiella chishuiensis AY17 T (94.3% sequence similarity). The major polar lipids are phosphatidylethanolamine and glycolipid. Strain H2 T contained MK-7 as the only menaquinone as well as iso-C 15:0 , iso-C 15:1 G and iso-C 17:0 3-OH as the major fatty acids (> 15%). The DNA G+C content of strain H2 T was determined to be 48.3 mol%. Based on the phylogenetic, phenotypic characteristics and chemotaxonomic analysis data, strain H2 T (= KCTC 62115 T = JCM 32353 T ) should be classified as representative of a novel species of a novel genus within the family Chitinophagaceae, for which the name Edaphocola aurantiacus gen. nov., sp. nov., is proposed.
KW - Chitinophagaceae
KW - Edaphocola
KW - Novel genus
KW - Novel species
UR - http://www.scopus.com/inward/record.url?scp=85057226953&partnerID=8YFLogxK
U2 - 10.1007/s10482-018-1199-1
DO - 10.1007/s10482-018-1199-1
M3 - Article
C2 - 30474773
AN - SCOPUS:85057226953
SN - 0003-6072
VL - 112
SP - 687
EP - 694
JO - Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
JF - Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
IS - 5
ER -