TY - JOUR
T1 - Methylobacterium durans sp. nov., a radiation-resistant bacterium isolated from gamma ray-irradiated soil
AU - Kim, Jiyoun
AU - Chhetri, Geeta
AU - Kim, Inhyup
AU - Kim, Myung Kyum
AU - Seo, Taegun
N1 - Publisher Copyright:
© 2019, Springer Nature Switzerland AG.
PY - 2020/2/1
Y1 - 2020/2/1
N2 - A gamma radiation-resistant, Gram-stain negative, oxidase and catalase positive, aerobic, flagellated, rod-shaped, methylotrophic and pink-pigmented bacterial strain designated 17SD2-17 T was isolated from gamma-ray-irradiated soil collected in Korea. The 16S rRNA gene sequence analysis showed that strain 17SD2-17 T is phylogenetically related to Methylobacterium organophilum DSM 760 T (97.6%), Methylobacterium oxalidis 35aT (97.4%) and Methylobacterium soli YIM 48816 T (97.0%). The G+C content calculated based on the draft genome sequence is 68.7 mol%. The DNA–DNA hybridisation between 17SD2-17 T and its close relatives was found to be less than 40%. The predominant fatty acid was identified as summed feature 8 (C18:1ω7c and/or C18:1ω6c) and the major respiratory quinone as Q-10. The major polar lipids were found to be diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine. On the basis of the data from phenotypic tests and genotypic differences between strain 17SD2-17 T and its close phylogenetic relatives, strain 17SD2-17 T is concluded to represent a new species belonging to the genus Methylobacterium, for which the name Methylobacterium durans sp. nov. (= KCTC 52908 T = NBRC 112876 T) is proposed.
AB - A gamma radiation-resistant, Gram-stain negative, oxidase and catalase positive, aerobic, flagellated, rod-shaped, methylotrophic and pink-pigmented bacterial strain designated 17SD2-17 T was isolated from gamma-ray-irradiated soil collected in Korea. The 16S rRNA gene sequence analysis showed that strain 17SD2-17 T is phylogenetically related to Methylobacterium organophilum DSM 760 T (97.6%), Methylobacterium oxalidis 35aT (97.4%) and Methylobacterium soli YIM 48816 T (97.0%). The G+C content calculated based on the draft genome sequence is 68.7 mol%. The DNA–DNA hybridisation between 17SD2-17 T and its close relatives was found to be less than 40%. The predominant fatty acid was identified as summed feature 8 (C18:1ω7c and/or C18:1ω6c) and the major respiratory quinone as Q-10. The major polar lipids were found to be diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine. On the basis of the data from phenotypic tests and genotypic differences between strain 17SD2-17 T and its close phylogenetic relatives, strain 17SD2-17 T is concluded to represent a new species belonging to the genus Methylobacterium, for which the name Methylobacterium durans sp. nov. (= KCTC 52908 T = NBRC 112876 T) is proposed.
KW - Gamma-ray resistance
KW - Methylobacterium durans
KW - Methylotrophic metabolism
KW - Polyphasic taxonomy
UR - http://www.scopus.com/inward/record.url?scp=85073999288&partnerID=8YFLogxK
U2 - 10.1007/s10482-019-01331-2
DO - 10.1007/s10482-019-01331-2
M3 - Article
C2 - 31541329
AN - SCOPUS:85073999288
SN - 0003-6072
VL - 113
SP - 211
EP - 220
JO - Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
JF - Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
IS - 2
ER -